MiMeNet

source code examples (soil)

Example microbial counts file download
Example metabolite counts file download

source code examples (IBD)

Example metabolome annotation file download
Example microbial counts file download
Example metabolite counts file download

Sample metabolomics annotation table (optional)

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Sample microbial count values

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Sample metabolite count values

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Parameter to specify how many iterations of cross-validated evaluation to perform (num_run_cv) 20 10 5 4 2 Integer for number of iterations of 10-fold cross-validation to run on shuffled data in order to generate empirical background - Recommend at least 10 (num_background) 20 10 5 4 2 Transform the microbial features into relative abundance (RA) or center log-ratio (CLR). If the data is already transformed, apply 'None' to skip transformation. (micro_norm) RA CLR None Transform the metabolomic features into relative abundance (RA) or center log-ratio (CLR). If the data is already transformed, apply 'None' to skip transformation. (metab_norm) RA CLR None Annotation:

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